BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002G01SP1|AL425011
(984 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig952 1712 0.0
>3x_Contig952
Length = 3817
Score = 1712 bits (846), Expect = 0.0
Identities = 935/982 (95%)
Strand = Plus / Plus
Query: 3 tcattcggatatcwtgttagacgcatctgcctgtctcattcttcgadatattacttcagt 62
||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 2025 tcattcggatatcttgttagacgcatctacctgtctcattcttcgaaatattacttcagt 2084
Query: 63 gtatcagakacaggtcgacagcttcccgttactccgagcaatacaagadttgargtgtaa 122
|||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 2085 gtatcagaaacaggtcgacagcttcccgttactccgagcaatacaagaattgaagtgtaa 2144
Query: 123 atktwakrgagtggtaatcttcttatcgtactcagaacgatcgttagcgttagattccaa 182
|| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2145 atataaaagagtggtaatcttcttatcgtactcagaacgatcgttagcgttagattccaa 2204
Query: 183 cttagcttacragacccaacttttattaadctgtctcggtgggacaacaactcatctagt 242
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2205 cttagcttacaagacccaacttttattaaactgtctcggtgggacaacaactcatctagt 2264
Query: 243 tgaggraacacaactcarattaacagcgacgtggatttcattatattgtggtaccaatac 302
||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2265 tgaggaaacacaactcaaattaacagcaacgtggatttcattatattgtggtaccaatac 2324
Query: 303 gcccaatgarcagcaaatttwtcgcatgagccttagcraagrggtcttacracatttcga 362
||||||||| |||||||||| |||||||||||||||| ||| |||||||| |||||||||
Sbjct: 2325 gcccaatgaacagcaaatttatcgcatgagccttagcaaagaggtcttacaacatttcga 2384
Query: 363 catcaatccaatcgcrattgakagtdttctgtcactcacctcattagrggggttcttatc 422
||||||||||||||| ||||| ||| ||||||||||||||||||||| | ||||||||
Sbjct: 2385 catcaatccaatcgcaattgaaagtattctgtcactcacctcattagaagaattcttatc 2444
Query: 423 aatkagttatgggaagdgagccctactatttggcaaatttctcacagaataccaactagc 482
||| |||||||| || |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2445 aataagttatggaaaaagagccctactatatggcaaatttctcacagaataccaactagc 2504
Query: 483 tcatattgatgattttgtgacaatgagttggtcagagtgaattcattctcatacgtcggc 542
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2505 tcatattgatgattttgtgacaatgagttggtcagagtaaattcattctcatacgtcggc 2564
Query: 543 tcgartgarccttacccatccragctaaactcacgatctatttcrrccagtcatattgag 602
|||| ||| |||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 2565 tcgaatgaaccttacccatccaagctaaactcacgatctatttcaaccagtcatattgaa 2624
Query: 603 cgagctcttctagtattggtttcctgattttgatgaaccttttttttcccttcgaggatg 662
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2625 cgaactcttctagtattggtttcctgattttgatgaaccttttttttcccttcgaaaatg 2684
Query: 663 gaactgagccagaacatatcaaaatagaaaacttgaaaatagttaaaaatgtacgaacct 722
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2685 gaactgaaccaaaacatatcaaaatagaaaacttgaaaatagttaaaaatgtacgaacct 2744
Query: 723 ggcaaagctgtatcattccgaaagcataatagtctcgttaaagttttgattcaggcacca 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2745 ggcaaagctgtatcattccgaaagcataatagtctcgttaaagttttgattcaggcacca 2804
Query: 783 ggaaacctgtgacgtgatacattgagaacagggcttgataatcatggttgtactagcggt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2805 ggaaacctgtgacgtgatacattgagaacagggcttgataatcatggttgtactagcggt 2864
Query: 843 ttctatcactactcgtaagggttagcctttattgtctagacaattcagagatatcacgaa 902
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2865 ttctatcactactcgtaagggtaagcctttattgtctagacaattcagagatatcacgaa 2924
Query: 903 agatcgtgttatggrattgttgtcgaatttccagactttagttgccaattcctcaaagca 962
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2925 agatcgtgttatggaattgttgtcgaatttccagactttagttgccaattcctcaaagca 2984
Query: 963 gcacacttttgttgragatgaa 984
|||||||||||||| |||||||
Sbjct: 2985 gcacacttttgttgaagatgaa 3006
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4868
Number of Sequences: 1807
Number of extensions: 4868
Number of successful extensions: 114
Number of sequences better than 1.0e-20: 1
length of query: 984
length of database: 10,358,551
effective HSP length: 16
effective length of query: 968
effective length of database: 10,329,639
effective search space: 9999090552
effective search space used: 9999090552
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)